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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9947 and 9948 are separated by 285 nucleotides
9948 and 9949 are separated by 523 nucleotides
9949 and 9950 are separated by 597 nucleotides
9950 and 9951 are separated by 162 nucleotides
mRNA_1579: 9947 - Hypothetical Protein, at 648,385 to 649,747
9947
mRNA_1580: 9948 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 650,033 to 651,263
9948
mRNA_1581: 9949 - HMMPfam-Protein of unknown function (DUF3759)-PF12585, at 651,787 to 652,843
9949
mRNA_1582: 9950 - K01381 PEP4 saccharopepsin, at 653,441 to 655,468
9950
mRNA_1583: 9951 - HMMPfam-Mediator complex protein-PF10280, at 655,631 to 656,397
9951
Group
Condition
mRNA
_1579
mRNA
_1580
mRNA
_1581
mRNA
_1582
mRNA
_1583
9947
9948
9949
9950
9951
auxotrophy
YNB Glucose 75mM Methionine
-0.7
-0.2
-0.1
-2.9
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
-0.3
-0.2
-1.9
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.0
-0.2
-2.5
N.D.
auxotrophy
Dropout Complete
-0.3
+0.1
-0.3
-2.6
N.D.
growth on oleic acid
YNB Glucose
-0.4
-0.1
-0.1
-2.4
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.7
+0.2
-0.5
-1.8
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
+0.0
-0.6
-1.8
N.D.
growth on oleic acid
YNB Oleic Acid
-1.0
+0.2
-0.9
-0.5
N.D.
auxotrophy
YNB Glucose
-0.3
+0.2
-0.3
-1.0
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
+0.8
-0.7
-0.8
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.4
-0.1
-0.7
N.D.
growth on ricinoleic acid
YNB Glucose
-0.4
+0.3
-1.0
+1.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
+0.0
+0.3
+0.2
N.D.
growth on ypd
YPD
+0.2
+0.2
-0.3
+0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.0
+0.2
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.6
+0.7
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.5
+0.4
+0.4
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.2
+0.3
+0.6
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-1.2
+0.3
-0.6
+2.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.0
+0.6
+0.4
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.1
-0.2
+1.6
N.D.
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