Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9948 and 9949 are separated by 523 nucleotides9949 and 9950 are separated by 597 nucleotides9950 and 9951 are separated by 162 nucleotides9951 and 9952 are separated by 633 nucleotides mRNA_1580: 9948 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 650,033 to 651,263 9948 mRNA_1581: 9949 - HMMPfam-Protein of unknown function (DUF3759)-PF12585, at 651,787 to 652,843 9949 mRNA_1582: 9950 - K01381 PEP4 saccharopepsin, at 653,441 to 655,468 9950 mRNA_1583: 9951 - HMMPfam-Mediator complex protein-PF10280, at 655,631 to 656,397 9951 mRNA_1584: 9952 - Hypothetical Protein, at 657,031 to 658,127 9952
Group Condition mRNA_1580 mRNA_1581 mRNA_1582 mRNA_1583 mRNA_1584
9948 9949 9950 9951 9952
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 -2.9 N.D. N.D.
auxotrophy Dropout Complete +0.1 -0.3 -2.6 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.2 -2.5 N.D. N.D.
growth on oleic acid YNB Glucose -0.1 -0.1 -2.4 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.2 -1.9 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.6 -1.8 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.5 -1.8 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.2 -0.9 -0.5 N.D. N.D.
auxotrophy YNB Glucose +0.2 -0.3 -1.0 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 -0.7 -0.8 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.1 -0.7 N.D. N.D.
growth on ypd YPD +0.2 -0.3 +0.0 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.2 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.4 +0.4 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.3 -1.0 +1.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 +0.7 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.3 +0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.3 +0.6 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.6 +0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 +1.6 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.6 +2.1 N.D. N.D.
remove
mRNA_1580
plot
remove
mRNA_1581
plot
remove
mRNA_1582
remove
mRNA_1583
plot
remove
mRNA_1584
plot