Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9953 and 9954 are separated by 154 nucleotides9954 and 9955 are separated by 788 nucleotides9955 and 9956 are separated by 307 nucleotides9956 and 9957 are separated by 116 nucleotides mRNA_1585: 9953 - K00916 CTK1 CTD kinase subunit alpha, at 659,402 to 660,723 9953 mRNA_1586: 9954 - BLAST ribosomal protein [Moniliophthora roreri MCA 2997], at 660,878 to 663,649 9954 mRNA_1587: 9955 - HMMPfam-Protein of unknown function (DUF3759)-PF12585, at 664,438 to 664,902 9955 mRNA_1588: 9956 - HMMPfam-Domain of unknown function (DUF202)-PF02656, at 665,210 to 666,583 9956 mRNA_1589: 9957 - Hypothetical Protein, at 666,700 to 668,966 9957
Group Condition mRNA_1585 mRNA_1586 mRNA_1587 mRNA_1588 mRNA_1589
9953 9954 9955 9956 9957
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.3 -0.3 -2.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.0 -0.3 -1.6
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.1 -0.3 -1.3
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.3 -0.2 -1.2
auxotrophy YNB Glucose N.D. N.D. +0.1 -0.0 -1.7
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.1 -0.5 -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.0 +0.2 -1.7
growth on oleic acid YNB Glucose N.D. N.D. -0.3 -0.1 -1.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.4 -0.1 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.2 +0.4 -1.8
auxotrophy Dropout Complete N.D. N.D. +0.2 +0.2 -1.6
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.5 -0.2 -1.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.2 +0.6 -1.7
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.4 -0.3 -0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.2 +0.4 -1.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.3 -0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.0 -0.2 -0.5
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.3 -0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.2 -0.2 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.2 -0.5 +0.3
growth on ypd YPD N.D. N.D. -0.8 -0.2 +0.5
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