Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9964 and 9965 are separated by 89 nucleotides9965 and 9966 are separated by 267 nucleotides9966 and 9967 are separated by 407 nucleotides9967 and 9968 are separated by 498 nucleotides mRNA_1596: 9964 - K14557 UTP6 U3 small nucleolar RNA-associated protein 6, at 686,125 to 688,577 9964 mRNA_1597: 9965 - Hypothetical Protein, at 688,667 to 689,443 9965 mRNA_1598: 9966 - Hypothetical Protein, at 689,711 to 690,052 9966 mRNA_1599: 9967 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 690,460 to 691,819 9967 mRNA_1600: 9968 - K12178 COPS4, CSN4 COP9 signalosome complex subunit 4, at 692,318 to 693,945 9968
Group Condition mRNA_1596 mRNA_1597 mRNA_1598 mRNA_1599 mRNA_1600
9964 9965 9966 9967 9968
growth on ricinoleic acid YNB Ricinoleic Acid -1.8 N.D. N.D. -0.4 -1.7
facs on lipid accumulation Sorted High BODIPY Gate -2.9 N.D. N.D. -0.2 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -1.5 N.D. N.D. -1.1 -0.9
facs on lipid accumulation Sorted Low BODIPY Gate -3.0 N.D. N.D. +0.5 -0.5
auxotrophy YNB Glucose -1.9 N.D. N.D. -0.1 -0.7
growth on ricinoleic acid YNB Glucose -1.3 N.D. N.D. -0.6 -0.8
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. N.D. -0.5 -1.0
facs on lipid accumulation Sorted No BODIPY Gate -1.9 N.D. N.D. +0.5 -0.5
growth on oleic acid YNB Oleic Acid -0.5 N.D. N.D. -0.1 -1.2
auxotrophy Dropout Complete -1.2 N.D. N.D. +0.1 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. N.D. -0.1 -1.1
auxotrophy YNB Glucose 75mM Arginine -0.8 N.D. N.D. -0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 N.D. N.D. -0.2 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.9 N.D. N.D. -0.0 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.7 N.D. N.D. +0.1 +0.4
growth on oleic acid YNB Glucose +0.2 N.D. N.D. +0.1 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.9 N.D. N.D. -0.3 +0.2
growth on ypd YPD -0.0 N.D. N.D. +0.5 +0.9
ypd buoyancy 40 hrs High Buoyancy +0.4 N.D. N.D. +0.6 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.3 N.D. N.D. +0.3 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +2.0 N.D. N.D. +0.2 +0.5
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