Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9965 and 9966 are separated by 267 nucleotides9966 and 9967 are separated by 407 nucleotides9967 and 9968 are separated by 498 nucleotides9968 and 9969 are separated by 346 nucleotides mRNA_1597: 9965 - Hypothetical Protein, at 688,667 to 689,443 9965 mRNA_1598: 9966 - Hypothetical Protein, at 689,711 to 690,052 9966 mRNA_1599: 9967 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 690,460 to 691,819 9967 mRNA_1600: 9968 - K12178 COPS4, CSN4 COP9 signalosome complex subunit 4, at 692,318 to 693,945 9968 mRNA_1601: 9969 - HMMPfam-Protein of unknown function (DUF1682)-PF07946,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 694,292 to 695,992 9969
Group Condition mRNA_1597 mRNA_1598 mRNA_1599 mRNA_1600 mRNA_1601
9965 9966 9967 9968 9969
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.4 -1.7 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -1.1 -0.9 -0.5
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.1 -1.2 -0.4
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.5 -1.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.2 -0.7 -0.4
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.6 -0.8 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.1 -1.1 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.2 -0.6 -0.1
auxotrophy YNB Glucose N.D. N.D. -0.1 -0.7 +0.2
auxotrophy Dropout Complete N.D. N.D. +0.1 -0.6 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.1 -0.5 -0.0
growth on oleic acid YNB Glucose N.D. N.D. +0.1 -0.6 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.3 +0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.5 -0.5 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.3 -0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.5 -0.5 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.2 +0.5 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.0 +0.2 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.1 +0.4 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.6 +0.5 +0.3
growth on ypd YPD N.D. N.D. +0.5 +0.9 +0.0
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