Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9970 and 9971 are separated by 492 nucleotides9971 and 9972 are separated by 143 nucleotides9972 and 9973 are separated by 94 nucleotides9973 and 9974 are separated by 412 nucleotides mRNA_1602: 9970 - HMMPfam-Protein of unknown function (DUF2013)-PF09431, at 696,270 to 698,823 9970 mRNA_1603: 9971 - KOG2948 Predicted metal-binding protein, at 699,316 to 700,594 9971 mRNA_1604: 9972 - K02209 MCM5, CDC46 DNA replication licensing factor MCM5, at 700,738 to 703,638 9972 mRNA_1605: 9973 - Hypothetical Protein, at 703,733 to 704,608 9973 mRNA_1606: 9974 - Hypothetical Protein, at 705,021 to 705,665 9974
Group Condition mRNA_1602 mRNA_1603 mRNA_1604 mRNA_1605 mRNA_1606
9970 9971 9972 9973 9974
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. N.D. +0.2 -3.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 N.D. N.D. +0.3 -1.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 N.D. N.D. +0.5 -1.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. N.D. -0.4 -0.7
auxotrophy Dropout Complete +0.0 N.D. N.D. -0.1 -0.7
auxotrophy YNB Glucose +0.3 N.D. N.D. -0.3 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. N.D. -0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. N.D. +0.6 -0.7
growth on oleic acid YNB Oleic Acid -0.0 N.D. N.D. -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 N.D. N.D. +0.4 -1.4
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. N.D. -0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.6 N.D. N.D. -0.1 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. N.D. -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. N.D. +0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. N.D. +0.5 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. N.D. +0.1 +0.4
growth on ypd YPD -0.2 N.D. N.D. -0.4 +0.8
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. N.D. +0.5 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 N.D. N.D. -0.0 +0.1
growth on ricinoleic acid YNB Glucose +0.7 N.D. N.D. -0.3 +0.3
growth on oleic acid YNB Glucose +0.1 N.D. N.D. +0.4 +0.6
remove
mRNA_1602
plot
remove
mRNA_1603
plot
remove
mRNA_1604
remove
mRNA_1605
plot
remove
mRNA_1606
plot