Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9976 and 9977 are separated by 1127 nucleotides9977 and 9978 are separated by 1196 nucleotides9978 and 9979 are separated by 144 nucleotides9979 and 9980 are separated by 261 nucleotides mRNA_1608: 9976 - K19704 PTC1 protein phosphatase PTC1, at 709,938 to 711,637 9976 mRNA_1609: 9977 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 712,765 to 713,275 9977 mRNA_1610: 9978 - HMMPfam-CrcB-like protein-PF02537, at 714,472 to 715,757 9978 mRNA_1611: 9979 - K04708 E1.1.1.102 3-dehydrosphinganine reductase, at 715,902 to 717,266 9979 mRNA_1612: 9980 - Hypothetical Protein, at 717,528 to 719,368 9980
Group Condition mRNA_1608 mRNA_1609 mRNA_1610 mRNA_1611 mRNA_1612
9976 9977 9978 9979 9980
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 -0.1 -1.3 N.D. -0.5
auxotrophy Dropout Complete -0.6 -0.8 -0.6 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.5 -0.3 N.D. -0.5
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 -0.8 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.0 -1.0 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.4 -0.4 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.3 -0.1 N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.5 +0.0 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.3 +0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.2 -0.7 N.D. +0.1
growth on ypd YPD +0.8 -0.2 -0.4 N.D. -0.6
growth on oleic acid YNB Oleic Acid -0.3 -0.2 +0.3 N.D. -0.1
growth on oleic acid YNB Glucose -0.0 -0.3 +0.3 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 -0.6 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.0 N.D. +0.2
auxotrophy YNB Glucose -0.5 +0.2 -0.1 N.D. +0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 +0.1 N.D. +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.1 -0.1 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.6 -0.0 -0.5 N.D. +0.4
growth on ricinoleic acid YNB Glucose -0.2 -0.4 +0.9 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.3 -0.1 N.D. +0.2
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