Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9977 and 9978 are separated by 1196 nucleotides9978 and 9979 are separated by 144 nucleotides9979 and 9980 are separated by 261 nucleotides9980 and 9981 are separated by 180 nucleotides mRNA_1609: 9977 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 712,765 to 713,275 9977 mRNA_1610: 9978 - HMMPfam-CrcB-like protein-PF02537, at 714,472 to 715,757 9978 mRNA_1611: 9979 - K04708 E1.1.1.102 3-dehydrosphinganine reductase, at 715,902 to 717,266 9979 mRNA_1612: 9980 - Hypothetical Protein, at 717,528 to 719,368 9980 mRNA_1613: 9981 - K01228 GCS1 mannosyl-oligosaccharide glucosidase, at 719,549 to 722,839 9981
Group Condition mRNA_1609 mRNA_1610 mRNA_1611 mRNA_1612 mRNA_1613
9977 9978 9979 9980 9981
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -1.3 N.D. -0.5 -0.2
auxotrophy Dropout Complete -0.8 -0.6 N.D. +0.1 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.8 N.D. +0.2 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.1 N.D. -0.2 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.0 N.D. -0.1 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.3 N.D. -0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.4 N.D. +0.2 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.7 N.D. +0.1 -0.6
growth on ypd YPD -0.2 -0.4 N.D. -0.6 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -1.0 N.D. +0.0 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.1 N.D. -0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.1 N.D. +0.1 -0.7
growth on oleic acid YNB Oleic Acid -0.2 +0.3 N.D. -0.1 -0.3
growth on oleic acid YNB Glucose -0.3 +0.3 N.D. -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.6 N.D. +0.2 -0.2
auxotrophy YNB Glucose +0.2 -0.1 N.D. +0.5 -0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.5 N.D. +0.4 +0.0
growth on ricinoleic acid YNB Glucose -0.4 +0.9 N.D. +0.2 -0.7
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 N.D. +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.1 N.D. +0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 N.D. +0.4 +0.4
remove
mRNA_1609
plot
remove
mRNA_1610
plot
remove
mRNA_1611
remove
mRNA_1612
plot
remove
mRNA_1613
plot