Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9978 and 9979 are separated by 144 nucleotides9979 and 9980 are separated by 261 nucleotides9980 and 9981 are separated by 180 nucleotides9981 and 9982 are separated by 90 nucleotides mRNA_1610: 9978 - HMMPfam-CrcB-like protein-PF02537, at 714,472 to 715,757 9978 mRNA_1611: 9979 - K04708 E1.1.1.102 3-dehydrosphinganine reductase, at 715,902 to 717,266 9979 mRNA_1612: 9980 - Hypothetical Protein, at 717,528 to 719,368 9980 mRNA_1613: 9981 - K01228 GCS1 mannosyl-oligosaccharide glucosidase, at 719,549 to 722,839 9981 mRNA_1614: 9982 - KOG2819 Uncharacterized conserved protein, at 722,930 to 724,798 9982
Group Condition mRNA_1610 mRNA_1611 mRNA_1612 mRNA_1613 mRNA_1614
9978 9979 9980 9981 9982
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 N.D. -0.5 -0.2 -0.8
auxotrophy YNB Glucose 75mM Arginine -0.8 N.D. +0.2 -0.7 +0.0
growth on ypd YPD -0.4 N.D. -0.6 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 N.D. +0.1 -0.6 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. -0.5 -0.1 +0.0
auxotrophy Dropout Complete -0.6 N.D. +0.1 -0.6 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.4 N.D. +0.2 -0.6 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 N.D. +0.2 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. +0.2 -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.2 -0.2 +0.0
auxotrophy YNB Glucose -0.1 N.D. +0.5 -0.8 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 N.D. +0.0 +0.2 +0.8
growth on oleic acid YNB Glucose +0.3 N.D. -0.1 -0.2 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. -0.2 -0.8 +1.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. +0.2 +0.0 +0.2
growth on oleic acid YNB Oleic Acid +0.3 N.D. -0.1 -0.3 +0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.5 N.D. +0.4 +0.0 +0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. +0.1 -0.7 +1.8
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 N.D. -0.1 -0.8 +2.1
growth on ricinoleic acid YNB Glucose +0.9 N.D. +0.2 -0.7 +1.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.4 +0.4 +0.4
remove
mRNA_1610
plot
remove
mRNA_1611
plot
remove
mRNA_1612
remove
mRNA_1613
plot
remove
mRNA_1614
plot