Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9979 and 9980 are separated by 261 nucleotides9980 and 9981 are separated by 180 nucleotides9981 and 9982 are separated by 90 nucleotides9982 and 9983 are separated by 468 nucleotides mRNA_1611: 9979 - K04708 E1.1.1.102 3-dehydrosphinganine reductase, at 715,902 to 717,266 9979 mRNA_1612: 9980 - Hypothetical Protein, at 717,528 to 719,368 9980 mRNA_1613: 9981 - K01228 GCS1 mannosyl-oligosaccharide glucosidase, at 719,549 to 722,839 9981 mRNA_1614: 9982 - KOG2819 Uncharacterized conserved protein, at 722,930 to 724,798 9982 mRNA_1615: 9983 - K03283 HSPA1_8 heat shock 70kDa protein 1/8, at 725,267 to 727,926 9983
Group Condition mRNA_1611 mRNA_1612 mRNA_1613 mRNA_1614 mRNA_1615
9979 9980 9981 9982 9983
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.5 -0.2 -0.8 -1.5
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 -0.7 +1.8 -4.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 -0.6 +0.3 -1.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 -0.2 +0.0 -1.7
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 -0.2 +0.0 -1.2
growth on ypd YPD N.D. -0.6 +0.2 -0.2 -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.5 -0.1 +0.0 -0.5
growth on oleic acid YNB Glucose N.D. -0.1 -0.2 +0.3 -0.7
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 -0.6 +0.1 -0.3
auxotrophy Dropout Complete N.D. +0.1 -0.6 +0.4 +0.2
auxotrophy YNB Glucose N.D. +0.5 -0.8 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 -0.3 -0.2 +0.5
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 -0.7 +0.0 +0.8
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 +0.2 +0.8 -0.8
growth on ricinoleic acid YNB Glucose N.D. +0.2 -0.7 +1.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.0 +0.2 +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.3 +0.7 +0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.4 +0.0 +0.7 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.4 +0.4 +0.4 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 -0.8 +1.5 +1.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 -0.8 +2.1 +1.3
remove
mRNA_1611
plot
remove
mRNA_1612
plot
remove
mRNA_1613
remove
mRNA_1614
plot
remove
mRNA_1615
plot