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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9996 and 9997 are separated by 791 nucleotides
9997 and 9998 are separated by 470 nucleotides
9998 and 9999 are separated by 357 nucleotides
9999 and 10000 are separated by 1563 nucleotides
mRNA_1628: 9996 - Hypothetical Protein, at 753,218 to 753,980
9996
mRNA_1629: 9997 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 754,772 to 756,288
9997
mRNA_1630: 9998 - SUPERFAMILY--SSF81383, at 756,759 to 757,602
9998
mRNA_1631: 9999 - BLAST Tyrosine-protein phosphatase non-receptor type 23 [St..., at 757,960 to 758,498
9999
mRNA_1632: 10000 - K00036 G6PD, zwf glucose-6-phosphate 1-dehydrogenase, at 760,062 to 761,705
10000
Group
Condition
mRNA
_1628
mRNA
_1629
mRNA
_1630
mRNA
_1631
mRNA
_1632
9996
9997
9998
9999
10000
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.1
+0.3
-0.6
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.4
-0.8
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.5
+0.1
+0.1
-0.3
N.D.
auxotrophy
Dropout Complete
-0.3
-0.2
-0.0
+0.1
N.D.
growth on oleic acid
YNB Oleic Acid
-0.2
-0.0
+0.3
-0.4
N.D.
growth on ricinoleic acid
YNB Glucose
-0.3
+0.2
+0.1
-0.4
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.5
+0.1
+0.3
-0.3
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.1
+0.4
+0.1
N.D.
auxotrophy
YNB Glucose
-0.5
+0.2
+0.4
-0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.7
-0.1
-0.2
-0.4
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
+0.5
+0.0
+0.0
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
+0.3
+0.6
+0.1
N.D.
growth on ypd
YPD
+0.1
+0.0
+0.5
+0.2
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.5
+0.4
+0.2
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.7
+0.4
+0.1
N.D.
growth on oleic acid
YNB Glucose
+0.1
+0.2
+0.7
+0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.0
+1.0
+0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.6
+0.4
+0.3
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.8
+0.1
+0.6
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.7
+0.7
+0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.3
+0.8
+0.5
N.D.
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