MetaCyc Pathway: ammonia assimilation cycle III in Rhodosporidium toruloides IFO0880

MetaCyc Pathway: ammonia assimilation cycle III in Rhodosporidium toruloides IFO0880

Glutamate synthase (NADPH):
L-glutamine + H₂O→ammonium + L-glutamate (EC 1.4.1.13; 1.4.1.14; 1.4.7.1; 3.5.1.2; 3.5.1.38; 4.3.2.10; 4.3.3.6; 6.3.4.2; 6.3.5.13; 6.3.5.2; 6.3.5.4; 6.3.5.5; 6.3.5.6; 6.3.5.7)

mRNA_1908 (10276)

mRNA_3000 (11368)

mRNA_3068 (11436)

mRNA_3934 (12302)

mRNA_4272 (12640)

mRNA_4929 (13297)

mRNA_6769 (15137)

mRNA_7345 (15713)

mRNA_7388 (15756)

mRNA_8107 (16475)

mRNA_8247 (16615)

mRNA_8313 (16681)

Glutamate synthase (NADPH) (in reverse):
ammonium + 2-oxoglutarate + NADPH + H⁺→L-glutamate + NADP⁺ + H₂O (EC 1.4.1.13; 1.4.1.4)

mRNA_3880 (12248)

mRNA_7345 (15713)

Glutamate--ammonia ligase:
ammonium + L-glutamate + ATP→L-glutamine + ADP + H⁺ + phosphate (EC 6.3.1.2)

mRNA_3476 (11844)

mRNA_3483 (11851)

mRNA_591 (8959)

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information