MetaCyc Pathway: nicotine degradation I (pyridine pathway) in Rhodosporidium toruloides IFO0880

Add experiment(s):


Nicotine dehydrogenase:
(S)-nicotine + an oxidized pseudoazurin + H2O→(S)-6-hydroxynicotine + 2 H+ + a reduced pseudoazurin
(EC 1.5.99.4)
No genes
Nicotine dehydrogenase:
(R)-nicotine + an oxidized unknown electron carrier + H2O→(R)-6-hydroxynicotine + a reduced unknown two electron carrier
(EC 1.5.99.4)
No genes
(S)-6-hydroxynicotine oxidase:
(S)-6-hydroxynicotine + dioxygen→6-hydroxy-N-methylmyosmine + hydrogen peroxide
(EC 1.5.3.5)
No genes
(R)-6-hydroxynicotine oxidase:
(R)-6-hydroxynicotine + dioxygen→6-hydroxy-N-methylmyosmine + hydrogen peroxide
(EC 1.5.3.6)
No genes
(S)-6-hydroxynicotine oxidase:
6-hydroxy-N-methylmyosmine + H2O→6-hydroxypseudooxynicotine
(spontaneous) (EC 1.5.3.5; 1.5.3.6)
No genes
6-hydroxypseudooxynicotine + an oxidized unknown electron carrier + H2O→2,6-dihydroxypseudooxynicotine + a reduced unknown two electron carrier (EC 1.5.99.14)
No genes
2,6-dihydroxypseudooxynicotine + H2O→2,6-dihydroxypyridine + 4-methylaminobutanoate + H+ (EC 3.7.1.19)
No genes
2,6-dihydroxypyridine 3-monooxygenase:
2,6-dihydroxypyridine + NADH + dioxygen + H+→2,3,6-trihydroxypyridine + NAD+ + H2O
(EC 1.14.13.10)
No genes
4-methylaminobutanoate + dioxygen + H2O→succinate semialdehyde + hydrogen peroxide + methylamine (EC 1.5.3.21)
No genes
4-methylaminobutanoate + dioxygen + H2O→4-aminobutanoate + formaldehyde + hydrogen peroxide (EC 1.5.3.19)
No genes
4-aminobutyrate transaminase:
4-aminobutanoate + 2-oxoglutarate→succinate semialdehyde + L-glutamate
(EC 2.6.1.19)
mRNA_2569 (10937)
mRNA_7537 (15905)
2,3,6-trihydroxypyridine→6,3-dihydroxy-2-pyridinone + H+ (spontaneous)
No genes
2 6,3-dihydroxy-2-pyridinone + 2 an oxidized unknown electron carrier→nicotine blue + 2 a reduced unknown two electron carrier (spontaneous)
No genes
6,3-dihydroxy-2-pyridinone + H2O→2-oxoglutaramate
No genes
succinate semialdehyde + NADP+ + H2O→succinate + NADPH + 2 H+ (EC 1.2.1.79)
No genes
nicotine blue + NAD(P)H + 3 H+→nicotine blue leuco form + NAD(P)+ (EC 1.1.1.328)
No genes
2-oxoglutaramate + H2O→2-oxoglutarate + ammonium (EC 3.5.1.111; 3.5.1.3)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information