MetaCyc Pathway: octane oxidation in Rhodosporidium toruloides IFO0880

Add experiment(s):


Rubredoxin--NAD(+) reductase (in reverse):
NADH + 2 an oxidized rubredoxin→2 a reduced rubredoxin + NAD+ + H+
(EC 1.18.1.1)
No genes
Alkane 1-monooxygenase:
2 a reduced rubredoxin + octane + dioxygen + 2 H+→octan-1-ol + 2 an oxidized rubredoxin + H2O
(EC 1.14.15.3)
No genes
octan-1-ol + an oxidized unknown electron carrier→1-octanal + a reduced unknown two electron carrier
No genes
Aldehyde dehydrogenase (NAD(+)):
1-octanal + NAD+ + H2O→NADH + octanoate + 2 H+
(EC 1.2.1.3)
mRNA_2053 (10421)
mRNA_2289 (10657)
mRNA_2380 (10748)
mRNA_2756 (11124)
mRNA_3674 (12042)
mRNA_3891 (12259)
mRNA_4582 (12950)
mRNA_5058 (13426)
mRNA_7446 (15814)
mRNA_7955 (16323)
mRNA_8468 (16836)
mRNA_324 (8692)
Long-chain-fatty-acid--CoA ligase:
octanoate + ATP + coenzyme A→octanoyl-CoA + AMP + diphosphate
(EC 6.2.1.3)
mRNA_4187 (12555)
mRNA_7380 (15748)

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information