MetaCyc Pathway: incomplete reductive TCA cycle in Rhodosporidium toruloides IFO0880

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Pyruvate synthase (in reverse):
acetyl-CoA + CO2 + H+ + 2 a reduced ferredoxin [iron-sulfur] cluster→pyruvate + coenzyme A + 2 an oxidized ferredoxin [iron-sulfur] cluster (EC 1.2.7.1)
No genes
Pyruvate carboxylase:
pyruvate + ATP + hydrogencarbonate→oxaloacetate + ADP + H+ + phosphate (EC 6.4.1.1)
mRNA_8262 (16630)
Malate dehydrogenase (in reverse):
oxaloacetate + NADH + H+→(S)-malate + NAD+ (EC 1.1.1.37; 1.1.1.38)
mRNA_2246 (10614)
mRNA_2810 (11178)
mRNA_4393 (12761)
mRNA_5549 (13917)
Fumarate hydratase:
(S)-malate→fumarate + H2O (EC 4.2.1.2)
mRNA_5633 (14001)
fumarate[in] + a menaquinol→succinate[in] + a menaquinone (EC 1.3.5.4)
No genes
Succinate--CoA ligase (ADP-forming):
succinate + ATP + coenzyme A→succinyl-CoA + ADP + phosphate (EC 6.2.1.5)
mRNA_7599 (15967)
mRNA_7776 (16144)
2-oxoglutarate synthase (in reverse):
succinyl-CoA + CO2 + H+ + 2 a reduced ferredoxin [iron-sulfur] cluster→2-oxoglutarate + coenzyme A + 2 an oxidized ferredoxin [iron-sulfur] cluster (EC 1.2.7.3)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information