MetaCyc Pathway: putrescine degradation IV in Rhodosporidium toruloides IFO0880
Putrescine oxidase: putrescine + dioxygen + H2O→4-aminobutanal + ammonium + hydrogen peroxide (EC 1.4.3.10) |
No genes |
Aminobutyraldehyde dehydrogenase: 4-aminobutanal + NAD+ + H2O→4-aminobutanoate + NADH + 2 H+ (EC 1.2.1.19) |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
4-aminobutanal→1-pyrroline + H2O (spontaneous) |
No genes |
Links:
- Pathway details at MetaCyc
- Fitness data for 12 genes
- All MetaCyc pathways for Rhodosporidium toruloides IFO0880
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information