MetaCyc Pathway: fatty acid α-oxidation I (plants) in Rhodosporidium toruloides IFO0880
a fatty acid + dioxygen→a (2R)-2-hydroperoxyfatty acid (EC 1.13.11.92) |
No genes |
a (2R)-2-hydroperoxyfatty acid + H+→a fatty aldehyde + CO2 + H2O (spontaneous) |
No genes |
a (2R)-2-hydroperoxyfatty acid + a reduced unknown two electron carrier→a (2R)-2-hydroxyfatty acid + an oxidized unknown electron carrier + H2O |
No genes |
Aldehyde dehydrogenase (NAD(+)): a fatty aldehyde + NAD+ + H2O→a fatty acid + NADH + 2 H+ (EC 1.2.1.3) |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
Links:
- Pathway details at MetaCyc
- Fitness data for 12 genes
- All MetaCyc pathways for Rhodosporidium toruloides IFO0880
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information