MetaCyc Pathway: L-carnitine degradation II in Rhodosporidium toruloides IFO0880

Add experiment(s):


L-carnitine + NAD(P)H + dioxygen + H+→L-malic semialdehyde + trimethylamine + NAD(P)+ + H2O (EC 1.14.13.239)
No genes
Aldehyde dehydrogenase (NADP(+)):
L-malic semialdehyde + NADP+ + H2O→(S)-malate + NADPH + 2 H+ (EC 1.2.1.4)
No genes
Malate dehydrogenase (oxaloacetate-decarboxylating):
(S)-malate + NAD+→pyruvate + CO2 + NADH (EC 1.1.1.38)
mRNA_4393 (12761)
mRNA_5549 (13917)

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information