MetaCyc Pathway: aerobic respiration I (cytochrome c) in Rhodosporidium toruloides IFO0880

Add experiment(s):


NADH[in] + 5 H+[in] + a ubiquinone→a ubiquinol + NAD+[in] + 4 H+[out] (EC 7.1.1.2)
mRNA_4649 (13017)
mRNA_4846 (13214)
mRNA_5398 (13766)
mRNA_6050 (14418)
mRNA_7496 (15864)
mRNA_7605 (15973)
mRNA_331 (8699)
mRNA_604 (8972)
mRNA_1441 (9809)
Succinate dehydrogenase (ubiquinone):
succinate[in] + a ubiquinone→a ubiquinol + fumarate[in] (EC 1.3.5.1)
mRNA_3261 (11629)
mRNA_3609 (11977)
mRNA_7913 (16281)
a ubiquinol + 2 an oxidized c-type cytochrome[out]→2 a reduced c-type cytochrome[out] + 2 H+[out] + a ubiquinone (EC 7.1.1.8)
No genes
4 a reduced c-type cytochrome[out] + dioxygen[in] + 8 H+[in]→2 H2O[in] + 4 an oxidized c-type cytochrome[out] + 4 H+[out] (EC 7.1.1.9)
mRNA_2949 (11317)
mRNA_797 (9165)

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information