MetaCyc Pathway: L-valine degradation II in Rhodosporidium toruloides IFO0880
Branched-chain-amino-acid transaminase: L-valine + 2-oxoglutarate→3-methyl-2-oxobutanoate + L-glutamate (EC 2.6.1.42) |
mRNA |
mRNA |
mRNA |
Branched-chain-2-oxoacid decarboxylase: 3-methyl-2-oxobutanoate + H+→isobutanal + CO2 (EC 4.1.1.72) |
No genes |
Alcohol dehydrogenase (in reverse): isobutanal + NADH + H+→isobutanol + NAD+ (EC 1.1.1.1) |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
Links:
- Pathway details at MetaCyc
- Fitness data for 20 genes
- All MetaCyc pathways for Rhodosporidium toruloides IFO0880
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information