MetaCyc Pathway: UDP-sugars interconversion in Rhodosporidium toruloides IFO0880

Add experiment(s):


UDP-glucose 4,6-dehydratase:
UDP-α-D-glucose→UDP-4-dehydro-6-deoxy-α-D-glucose + H2O (EC 4.2.1.76)
No genes
UDP-glucose 4-epimerase:
UDP-α-D-glucose→UDP-α-D-galactose (EC 5.1.3.2)
mRNA_601 (8969)
UDP-4-dehydro-6-deoxy-α-D-glucose→UDP-4-dehydro-β-L-rhamnose
No genes
UDP-glucose 6-dehydrogenase:
UDP-α-D-glucose + 2 NAD+ + H2O→UDP-α-D-glucuronate + 2 NADH + 3 H+ (EC 1.1.1.22)
mRNA_3408 (11776)
UDP-4-dehydro-β-L-rhamnose + NADPH + H+→UDP-β-L-rhamnose + NADP+
No genes
UDP-α-D-glucuronate + H+→UDP-D-apiose + CO2
No genes
UDP-glucuronate 4-epimerase:
UDP-α-D-glucuronate→UDP-α-D-galacturonate (EC 5.1.3.6)
No genes
UDP-glucuronate decarboxylase:
UDP-α-D-glucuronate + H+→UDP-α-D-xylose + CO2 (EC 4.1.1.35)
No genes
UDP-arabinose 4-epimerase (in reverse):
UDP-α-D-xylose→UDP-β-L-arabinopyranose (EC 5.1.3.5)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information