| a 2,3,4-saturated fatty acid + ATP + coenzyme A→a 2,3,4-saturated fatty acyl CoA + AMP + diphosphate |
| No genes |
Acyl-CoA oxidase:
a 2,3,4-saturated fatty acyl CoA + dioxygen→a (2E)-2-enoyl-CoA + hydrogen peroxide (EC 1.3.3.6) |
| mRNA_4374 (12742) |
| mRNA_1332 (9700) |
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA (EC 4.2.1.17) |
| mRNA_2742 (11110) |
| mRNA_3539 (11907) |
| mRNA_6437 (14805) |
| mRNA_8147 (16515) |
3-hydroxyacyl-CoA dehydrogenase:
a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA + NAD+→a 2,3,4-saturated 3-oxoacyl-CoA + NADH + H+ (EC 1.1.1.35) |
| mRNA_2835 (11203) |
Acetyl-CoA C-acyltransferase (in reverse):
a 2,3,4-saturated 3-oxoacyl-CoA + coenzyme A→a 2,3,4-saturated fatty acyl CoA + acetyl-CoA (EC 2.3.1.16) |
| mRNA_5445 (13813) |
| mRNA_5687 (14055) |
| mRNA_6860 (15228) |
| mRNA_310 (8678) |
| mRNA_517 (8885) |
| mRNA_697 (9065) |
Citrate (Si)-synthase:
acetyl-CoA + oxaloacetate + H2O→citrate + coenzyme A + H+ (EC 2.3.3.1; 2.3.3.16) |
| mRNA_2960 (11328) |
| mRNA_2963 (11331) |
| mRNA_180 (8548) |
Aconitate hydratase:
citrate→cis-aconitate + H2O (EC 4.2.1.3) |
| mRNA_3256 (11624) |
| mRNA_6232 (14600) |
Aconitate hydratase:
cis-aconitate + H2O→D-threo-isocitrate (EC 4.2.1.3) |
| mRNA_3256 (11624) |
| mRNA_6232 (14600) |
Isocitrate lyase:
D-threo-isocitrate→glyoxylate + succinate (EC 4.1.3.1) |
| mRNA_5654 (14022) |
| mRNA_5794 (14162) |
Malate synthase:
acetyl-CoA + glyoxylate + H2O→(S)-malate + coenzyme A + H+ (EC 2.3.3.9) |
| mRNA_1089 (9457) |
Succinate dehydrogenase (ubiquinone):
succinate[in] + an electron-transfer quinone→fumarate[in] + an electron-transfer quinol (EC 1.3.5.1) |
| mRNA_3261 (11629) |
| mRNA_3609 (11977) |
| mRNA_7913 (16281) |
Fumarate hydratase (in reverse):
fumarate + H2O→(S)-malate (EC 4.2.1.2) |
| mRNA_5633 (14001) |
Malate dehydrogenase:
(S)-malate + NAD+→oxaloacetate + NADH + H+ (EC 1.1.1.37; 1.1.1.38) |
| mRNA_2246 (10614) |
| mRNA_2810 (11178) |
| mRNA_4393 (12761) |
| mRNA_5549 (13917) |
Phosphoenolpyruvate carboxykinase (ATP):
oxaloacetate + ATP→phosphoenolpyruvate + ADP + CO2 (EC 4.1.1.49) |
| mRNA_2473 (10841) |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information