MetaCyc Pathway: superpathway of adenosine nucleotides de novo biosynthesis II in Rhodosporidium toruloides IFO0880
Adenylosuccinate synthase: IMP + L-aspartate + GTP→adenylo-succinate + GDP + 2 H+ + phosphate (EC 6.3.4.4) |
mRNA |
Adenylosuccinate lyase: adenylo-succinate→AMP + fumarate (EC 4.3.2.2) |
mRNA |
Adenylate kinase: AMP + ATP→2 ADP (EC 2.7.4.3) |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
Ribonucleoside-diphosphate reductase (in reverse): ADP + a reduced thioredoxin→dADP + an oxidized thioredoxin + H2O (EC 1.17.4.1) |
mRNA |
mRNA |
mRNA |
Ribonucleoside-diphosphate reductase (in reverse): ADP + a reduced NrdH glutaredoxin-like protein→dADP + an oxidized NrdH glutaredoxin-like protein + H2O (EC 1.17.4.1) |
mRNA |
mRNA |
mRNA |
Nucleoside-diphosphate kinase: dADP + ATP→ADP + dATP (EC 2.7.4.6) |
mRNA |
mRNA |
ATP + formate + H+→dATP + CO2 + H2O (EC 1.1.98.6) |
No genes |
Links:
- Pathway details at MetaCyc
- Fitness data for 15 genes
- All MetaCyc pathways for Rhodosporidium toruloides IFO0880
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information