MetaCyc Pathway: L-arginine degradation XIV (oxidative Stickland reaction) in Rhodosporidium toruloides IFO0880

Add experiment(s):


Arginine deiminase:
L-arginine + H2O→L-citrulline + ammonium (EC 3.5.3.6)
No genes
Ornithine carbamoyltransferase (in reverse):
L-citrulline + H+ + phosphate→L-ornithine + carbamoyl phosphate (EC 2.1.3.3)
mRNA_4934 (13302)
Ornithine racemase:
L-ornithine→D-ornithine (EC 5.1.1.12)
No genes
D-ornithine 4,5-aminomutase:
D-ornithine→(2R,4S)-2, 4-diaminopentanoate (EC 5.4.3.5)
No genes
2,4-diaminopentanoate dehydrogenase:
(2R,4S)-2, 4-diaminopentanoate + NAD(P)+ + H2O→(2R)-2-amino-4-oxopentanoate + ammonium + NAD(P)H + H+ (EC 1.4.1.12)
No genes
(2R)-2-amino-4-oxopentanoate + coenzyme A→acetyl-CoA + D-alanine (EC 2.3.1.263)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information