MetaCyc Pathway: quinate degradation II in Rhodosporidium toruloides IFO0880
| Quinate/shikimate dehydrogenase: L-quinate + NAD(P)+→3-dehydroquinate + NAD(P)H + H+ (EC 1.1.1.282) |
| No genes |
| 3-dehydroquinate dehydratase: 3-dehydroquinate→3-dehydroshikimate + H2O (EC 4.2.1.10) |
| mRNA |
| mRNA |
| mRNA |
| mRNA |
| mRNA |
| 3-dehydroshikimate→protocatechuate + H2O (EC 4.2.1.118) |
| mRNA |
| mRNA |
Links:
- Pathway details at MetaCyc
- Fitness data for 7 genes
- All MetaCyc pathways for Rhodosporidium toruloides IFO0880
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information