MetaCyc Pathway: Fe(II) oxidation in Rhodosporidium toruloides IFO0880

Add experiment(s):


Fe2+[out] + an oxidized rusticyanin[in]→a reduced rusticyanin[in] + Fe3+[out] (EC 1.16.9.1)
No genes
a reduced rusticyanin[out] + an oxidized Cyc1 cytochrome[out]→a reduced Cyc1 cytochrome[out] + an oxidized rusticyanin[out]
No genes
a reduced rusticyanin[out] + an oxidized CycA1 cytochrome[out]→a reduced CycA1 cytochrome[out] + an oxidized rusticyanin[out]
No genes
4 a reduced c-type cytochrome[out] + dioxygen[in] + 8 H+[in]→2 H2O[in] + 4 an oxidized c-type cytochrome[out] + 4 H+[out] (EC 7.1.1.9)
mRNA_2949 (11317)
mRNA_797 (9165)
2 a reduced CycA1 cytochrome[out] + 2 H+[in] + a ubiquinone→a ubiquinol + 2 an oxidized CycA1 cytochrome[out] (EC 7.1.1.8)
No genes
a ubiquinol + NAD+[in] + 4 H+[out]→NADH[in] + 5 H+[in] + a ubiquinone (EC 7.1.1.2)
mRNA_4649 (13017)
mRNA_4846 (13214)
mRNA_5398 (13766)
mRNA_6050 (14418)
mRNA_7496 (15864)
mRNA_7605 (15973)
mRNA_331 (8699)
mRNA_604 (8972)
mRNA_1441 (9809)

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information