MetaCyc Pathway: xyloglucan degradation II (exoglucanase) in Rhodosporidium toruloides IFO0880

Add experiment(s):


Xyloglucan-specific endo-beta-1,4-glucanase:
a xyloglucan + n H2O→n XLXG xyloglucan oligosaccharide + n XLFG xyloglucan oligosaccharide + n XXFG xyloglucan oligosaccharide (EC 3.2.1.151)
No genes
Beta-galactosidase:
XLXG xyloglucan oligosaccharide + H2O→XXXG xyloglucan oligosaccharide + D-galactopyranose (EC 3.2.1.23)
mRNA_5998 (14366)
mRNA_1492 (9860)
Alpha-L-fucosidase:
XXFG xyloglucan oligosaccharide + H2O→XXLG xyloglucan oligosaccharide + L-fucopyranose (EC 3.2.1.51)
No genes
Alpha-L-fucosidase:
XLFG xyloglucan oligosaccharide + H2O→XLLG xyloglucan oligosaccharide + L-fucopyranose (EC 3.2.1.51)
No genes
Beta-galactosidase:
XXLG xyloglucan oligosaccharide + H2O→XXXG xyloglucan oligosaccharide + D-galactopyranose (EC 3.2.1.23)
mRNA_5998 (14366)
mRNA_1492 (9860)
Beta-galactosidase:
XLLG xyloglucan oligosaccharide + 2 H2O→XXXG xyloglucan oligosaccharide + 2 D-galactopyranose (EC 3.2.1.23)
mRNA_5998 (14366)
mRNA_1492 (9860)
Oligoxyloglucan beta-glycosidase:
XXXG xyloglucan oligosaccharide + 3 H2O→3 isoprimeverose + D-glucopyranose (EC 3.2.1.120)
No genes
isoprimeverose + H2O→α-D-xylopyranose + D-glucopyranose (EC 3.2.1.177)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information