MetaCyc Pathway: spermidine biosynthesis III in Rhodosporidium toruloides IFO0880

Add experiment(s):


Arginine decarboxylase:
L-arginine + H+→agmatine + CO2 (EC 4.1.1.19)
No genes
Adenosylmethionine decarboxylase:
S-adenosyl-L-methionine + H+→S-adenosyl 3-(methylsulfanyl)propylamine + CO2 (EC 4.1.1.50)
mRNA_2849 (11217)
agmatine + S-adenosyl 3-(methylsulfanyl)propylamine→N1-(3-aminopropyl)agmatine + S-methyl-5'-thioadenosine + H+ (EC 2.5.1.104)
No genes
N1-(3-aminopropyl)agmatine + H2O→spermidine + urea (EC 3.5.3.24)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information