MetaCyc Pathway: C4 photosynthetic carbon assimilation cycle, NAD-ME type in Rhodosporidium toruloides IFO0880

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Carbonate dehydratase (in reverse):
CO2 + H2O→hydrogencarbonate + H+ (EC 4.2.1.1)
mRNA_4213 (12581)
mRNA_7775 (16143)
Phosphoenolpyruvate carboxylase (in reverse):
hydrogencarbonate + phosphoenolpyruvate→oxaloacetate + phosphate (EC 4.1.1.31)
No genes
Aspartate transaminase (in reverse):
oxaloacetate + L-glutamate→L-aspartate + 2-oxoglutarate (EC 2.6.1.1)
mRNA_5562 (13930)
mRNA_5913 (14281)
mRNA_7697 (16065)
mRNA_172 (8540)
mRNA_568 (8936)
mRNA_1267 (9635)
L-aspartate[in]→L-aspartate[out]
No genes
Aspartate transaminase:
L-aspartate + 2-oxoglutarate→oxaloacetate + L-glutamate (EC 2.6.1.1)
mRNA_5562 (13930)
mRNA_5913 (14281)
mRNA_7697 (16065)
mRNA_172 (8540)
mRNA_568 (8936)
mRNA_1267 (9635)
Malate dehydrogenase (in reverse):
oxaloacetate + NADH + H+→(S)-malate + NAD+ (EC 1.1.1.37; 1.1.1.38)
mRNA_2246 (10614)
mRNA_2810 (11178)
mRNA_4393 (12761)
mRNA_5549 (13917)
Malate dehydrogenase (oxaloacetate-decarboxylating):
(S)-malate + NAD+→CO2 + pyruvate + NADH (EC 1.1.1.38)
mRNA_4393 (12761)
mRNA_5549 (13917)
Alanine transaminase (in reverse):
pyruvate + L-glutamate→L-alanine + 2-oxoglutarate (EC 2.6.1.2)
mRNA_1267 (9635)
L-alanine[in]→L-alanine[out]
No genes
Alanine transaminase:
L-alanine + 2-oxoglutarate→pyruvate + L-glutamate (EC 2.6.1.2)
mRNA_1267 (9635)
Pyruvate, phosphate dikinase:
pyruvate + ATP + phosphate→phosphoenolpyruvate + AMP + diphosphate + H+ (EC 2.7.9.1)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information