MetaCyc Pathway: superpathway of guanosine nucleotides de novo biosynthesis I in Rhodosporidium toruloides IFO0880

Add experiment(s):


IMP dehydrogenase:
IMP + NAD+ + H2O→XMP + NADH + H+ (EC 1.1.1.205)
mRNA_27 (8395)
GMP synthase (glutamine-hydrolyzing):
XMP + ATP + L-glutamine + H2O→GMP + AMP + L-glutamate + diphosphate + 2 H+ (EC 6.3.5.2)
mRNA_7388 (15756)
Guanylate kinase:
GMP + ATP→GDP + ADP (EC 2.7.4.8)
mRNA_3157 (11525)
Nucleoside-diphosphate kinase:
GDP + ATP→GTP + ADP (EC 2.7.4.6)
mRNA_7311 (15679)
mRNA_575 (8943)
Ribonucleoside-diphosphate reductase (in reverse):
GDP + a reduced thioredoxin→dGDP + an oxidized thioredoxin + H2O (EC 1.17.4.1)
mRNA_2804 (11172)
mRNA_2922 (11290)
mRNA_5869 (14237)
Nucleoside-diphosphate kinase:
dGDP + ATP→dGTP + ADP (EC 2.7.4.6)
mRNA_7311 (15679)
mRNA_575 (8943)

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information