MetaCyc Pathway: anaerobic energy metabolism (invertebrates, cytosol) in Rhodosporidium toruloides IFO0880
Phosphoenolpyruvate carboxykinase (GTP) (in reverse): phosphoenolpyruvate + CO2 + GDP→oxaloacetate + GTP (EC 4.1.1.32) |
No genes |
Pyruvate kinase (in reverse): phosphoenolpyruvate + ADP + H+→pyruvate + ATP (EC 2.7.1.40) |
mRNA |
mRNA |
Phosphoenolpyruvate carboxykinase (GTP) (in reverse): phosphoenolpyruvate + CO2 + IDP→oxaloacetate + ITP (EC 4.1.1.32) |
No genes |
Alanine transaminase (in reverse): pyruvate + L-glutamate→2-oxoglutarate + L-alanine (EC 2.6.1.2) |
mRNA |
Malate dehydrogenase (in reverse): oxaloacetate + NADH + H+→(S)-malate + NAD+ (EC 1.1.1.37; 1.1.1.38) |
mRNA |
mRNA |
mRNA |
mRNA |
Alanine racemase: L-alanine→D-alanine (EC 5.1.1.1) |
No genes |
Aspartate transaminase: 2-oxoglutarate + L-aspartate→L-glutamate + oxaloacetate (EC 2.6.1.1) |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
mRNA |
Links:
- Pathway details at MetaCyc
- Fitness data for 12 genes
- All MetaCyc pathways for Rhodosporidium toruloides IFO0880
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information