MetaCyc Pathway: β-(1,4)-mannan degradation in Rhodosporidium toruloides IFO0880

Add experiment(s):


Mannan 1,4-mannobiosidase:
a β-(1,4)-D-mannan + n H2O→n-1 β-1,4-D-mannobiose
(EC 3.2.1.100)
No genes
Mannan endo-1,4-beta-mannosidase:
a β-(1,4)-D-mannan + H2O→2 a β-(1,4)-mannan oligosaccharide
(EC 3.2.1.78)
No genes
a β-(1,4)-mannan oligosaccharide + phosphate→a β-(1,4)-mannan oligosaccharide + α-D-mannose 1-phosphate (EC 2.4.1.319)
No genes
Cellobiose epimerase:
β-1,4-D-mannobiose→β-D-mannosyl-(1→4)-D-glucose
(EC 5.1.3.11)
No genes
β-D-mannosyl-(1→4)-D-glucose + phosphate→α-D-mannose 1-phosphate + D-glucopyranose (EC 2.4.1.281)
No genes
Phosphomannomutase:
α-D-mannose 1-phosphate→D-mannopyranose 6-phosphate
(EC 5.4.2.8)
mRNA_5343 (13711)
mRNA_873 (9241)
Mannose-6-phosphate isomerase:
D-mannopyranose 6-phosphate→β-D-fructofuranose 6-phosphate
(EC 5.3.1.8)
mRNA_8190 (16558)
mRNA_239 (8607)

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information