MetaCyc Pathway: α-tomatine degradation in Rhodosporidium toruloides IFO0880
| Beta-glucosidase: α-tomatine + H2O→β2-tomatine + β-D-glucopyranose (EC 3.2.1.21) |
| mRNA |
| mRNA |
| mRNA |
| mRNA |
| mRNA |
| α-tomatine + H2O→tomatidine + lycotetraose |
| No genes |
| α-tomatine + H2O→β1-tomatine + α-D-xylopyranose |
| No genes |
| β1-tomatine + H2O→γ-tomatine + β-D-glucopyranose |
| No genes |
| γ-tomatine + H2O→tomatidine galactoside + β-D-glucopyranose |
| No genes |
| tomatidine galactoside + H2O→tomatidine + β-D-galactopyranose |
| No genes |
Links:
- Pathway details at MetaCyc
- Fitness data for 5 genes
- All MetaCyc pathways for Rhodosporidium toruloides IFO0880
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information