MetaCyc Pathway: shikimate degradation I in Rhodosporidium toruloides IFO0880
| shikimate + a quinone→3-dehydroshikimate + a quinol (EC 1.1.5.8) |
| No genes |
| 3-dehydroshikimate→protocatechuate + H2O (EC 4.2.1.118) |
| mRNA |
| mRNA |
Links:
- Pathway details at MetaCyc
- Fitness data for 2 genes
- All MetaCyc pathways for Rhodosporidium toruloides IFO0880
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information