MetaCyc Pathway: superpathway of allantoin degradation in plants in Rhodosporidium toruloides IFO0880

Add experiment(s):


Allantoinase:
(S)-(+)-allantoin + H2O→allantoate + H+ (EC 3.5.2.5)
mRNA_3516 (11884)
Allantoate deiminase:
allantoate + 2 H+ + H2O→(S)-ureidoglycine + ammonium + CO2 (EC 3.5.3.9)
No genes
Allantoicase:
allantoate + H2O→(S)-ureidoglycolate + urea (EC 3.5.3.4)
mRNA_6356 (14724)
(S)-ureidoglycine + H2O→(S)-ureidoglycolate + ammonium (EC 3.5.3.26)
No genes
(S)-ureidoglycolate + 2 H+ + H2O→glyoxylate + 2 ammonium + CO2 (EC 3.5.1.116)
No genes
Ureidoglycolate lyase:
(S)-ureidoglycolate→glyoxylate + urea (EC 4.3.2.3)
No genes
Urease:
urea + 2 H+ + H2O→2 ammonium + CO2 (EC 3.5.1.5)
mRNA_2518 (10886)
mRNA_2839 (11207)

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information