SEED Subsystem: Acetyl-CoA fermentation to Butyrate in Rhodosporidium toruloides IFO0880

Experiments:

Role Gene Name  
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) No genes
3-hydroxybutyrate dehydrogenase (EC 1.1.1.30) No genes
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) No genes
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) No genes
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) No genes
Acetoacetate metabolism regulatory protein AtoC No genes
Acetoacetyl-CoA reductase (EC 1.1.1.36) No genes
Acetyl-CoA acetyltransferase (EC 2.3.1.9) No genes
Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) No genes
Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8) No genes
Butyrate kinase (EC 2.7.2.7) No genes
Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9) No genes
Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9) No genes
Butyryl-CoA dehydrogenase (EC 1.3.99.2) mRNA_2040 10408
  mRNA_3718 12086
  mRNA_4202 12570
  mRNA_4621 12989
  mRNA_5702 14070
  mRNA_7885 16253
  mRNA_595 8963
Electron transfer flavoprotein, alpha subunit mRNA_1701 10069
Electron transfer flavoprotein, beta subunit mRNA_1518 9886
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) mRNA_1850 10218
Enoyl-CoA hydratase (EC 4.2.1.17) mRNA_2742 11110
  mRNA_3539 11907
  mRNA_6437 14805
  mRNA_8147 16515
Ferredoxin-like protein No genes
Ferredoxin-like protein FixX No genes
Ferredoxin-like protein YdiT No genes
Ferredoxin-like protein YgcO No genes
Probable electron transfer flavoprotein-quinone oxidoreductase FixC (EC 1.5.5.-) No genes
phosphotransbutyrylase (EC 2.3.1.19) No genes

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