SEED Subsystem: Alginate metabolism in Rhodosporidium toruloides IFO0880

Experiments:

Role Gene Name  
Alginate biosynthesis protein Alg8 No genes
Alginate biosynthesis protein AlgX No genes
Alginate biosynthesis transcriptional activator No genes
Alginate lyase (EC 4.2.2.3) No genes
Alginate lyase precursor (EC 4.2.2.3) No genes
GDP-mannose 6-dehydrogenase (EC 1.1.1.132) No genes
Hexuronate transporter No genes
Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) No genes
Mannose-6-phosphate isomerase (EC 5.3.1.8) mRNA_239 8607
Pectin degradation protein KdgF No genes
Phosphomannomutase (EC 5.4.2.8) mRNA_5343 13711
  mRNA_873 9241
Poly(beta-D-mannuronate) C5 epimerase precursor (EC 5.1.3.-) No genes
Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) No genes
RNA polymerase sigma-H factor AlgT No genes
alginate biosynthesis protein AlgJ No genes
alginate o-acetyltransferase AlgF No genes
outer membrane protein AlgE No genes
poly(beta-D-mannuronate) lyase (EC 4.2.2.3) No genes

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