SEED Subsystem: Aromatic amino acid degradation in Rhodosporidium toruloides IFO0880

Experiments:

Role Gene Name  
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.-) No genes
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-) No genes
2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-) No genes
3,4-dihydroxyphenylacetate 2,3-dioxygenase (EC 1.13.11.15) No genes
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) No genes
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10) No genes
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60) No genes
5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) No genes
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase. No genes
Anthranilate dioxygenase large subunit No genes
Anthranilate dioxygenase reductase No genes
Anthranilate dioxygenase small subunit No genes
Aromatic amino acid transport protein AroP No genes
Aromatic ring-opening dioxygenase No genes
Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) mRNA_1736 10104
  mRNA_5309 13677
Homoprotocatechuate degradative operon repressor No genes
Indoleacetamide hydrolase (EC 3.5.1.-) No genes
Kynurenine formamidase, bacterial (EC 3.5.1.9) No genes
Phenylalanine hydroxylase transcriptional activator PhhR No genes
Phenylalanine-4-hydroxylase (EC 1.14.16.1) No genes
Phenylalanine-specific permease No genes
Predicted 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase No genes
Probable 5-carboxymethyl-2-hydroxymuconate delta isomerase No genes
Putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase No genes
Putative 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase oxidoreductase protein (EC 1.2.1.60) No genes
Putative fumarylacetoacetate (FAA) hydrolase No genes
Tryptophan 2,3-dioxygenase (EC 1.13.11.11) No genes
Tryptophan 2-monooxygenase (EC 1.13.12.3) No genes
Tryptophanase (EC 4.1.99.1) No genes

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