SEED Subsystem: Branched-Chain Amino Acid Biosynthesis in Rhodosporidium toruloides IFO0880

Experiments:

Role Gene Name  
(R)-citramalate synthase (EC 2.3.1.182) No genes
2-isopropylmalate synthase (EC 2.3.3.13) mRNA_7120 15488
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) mRNA_6546 14914
  mRNA_7648 16016
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) No genes
3-isopropylmalate dehydrogenase (EC 1.1.1.85) mRNA_2060 10428
  mRNA_5526 13894
Acetolactate synthase large subunit (EC 2.2.1.6) mRNA_7317 15685
Acetolactate synthase small subunit (EC 2.2.1.6) mRNA_1432 9800
Acetolactate synthase small subunit (EC 2.2.1.6), Xanthomonadales type No genes
Acetolactate synthase small subunit (EC 2.2.1.6), predicted No genes
Acetolactate synthase small subunit (EC 2.2.1.6), predicted, Archaeal type No genes
Acetolactate synthase small subunit (EC 2.2.1.6), predicted, Archaeal type 2 No genes
Branched-chain amino acid aminotransferase (EC 2.6.1.42) mRNA_5646 14014
  mRNA_6242 14610
  mRNA_6485 14853
Dihydroxy-acid dehydratase (EC 4.2.1.9) mRNA_6258 14626
  mRNA_1321 9689
Ketol-acid reductoisomerase (EC 1.1.1.86) mRNA_808 9176
  mRNA_809 9177
  mRNA_810 9178
Leucine dehydrogenase (EC 1.4.1.9) No genes
Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system No genes
Threonine dehydratase (EC 4.3.1.19) No genes
Threonine dehydratase biosynthetic (EC 4.3.1.19) mRNA_3541 11909
Threonine dehydratase, catabolic (EC 4.3.1.19) mRNA_4566 12934
Valine--pyruvate aminotransferase (EC 2.6.1.66) No genes

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