SEED Subsystem: Carotenoids in Rhodosporidium toruloides IFO0880

Experiments:

Role Gene Name  
"phi-Carotenoid synthase" (EC 1.3.-.- and EC 2.1.1-) No genes
2-vinyl bacteriochlorophyllide hydratase BchF (EC 4.2.1.-) No genes
4,4'-diapolycopene oxidase No genes
Beta-carotene hydroxylase No genes
Beta-carotene ketolase (EC 1.14.-.-) No genes
C50 carotenoid epsilon cyclase No genes
Carotenoid cis-trans isomerase (EC 5.2.-.-) No genes
CrtT-methyltransferase-like protein No genes
CrtV-methyltransferase-like protein No genes
Dehydrosqualene synthase (EC 2.5.1.-) No genes
Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) No genes
Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) No genes
Hydroxyneurosporene dehydrogenase (EC 1.-.-.-) No genes
Hydroxyneurosporene methyltransferase (EC 2.1.1.-) No genes
Hydroxyneurosporene synthase No genes
Lycopene beta cyclase (EC 1.14.-.-) No genes
Lycopene cyclase No genes
Lycopene elongase (EC 2.5.1.-) No genes
Lycopene epsilon cyclase No genes
Methoxyneurosporene dehydrogenase (EC 1.14.99.-) No genes
Neurosporene desaturase (EC 1.-.-.-) No genes
Phytoene dehydrogenase (EC 1.14.99.-) mRNA_217 8585
Phytoene dehydrogenase and related proteins No genes
Phytoene desaturase (EC 1.14.99.-) No genes
Phytoene desaturase, neurosporene or lycopene producing (EC 1.3.-.-) No genes
Phytoene desaturase, pro-zeta-carotene producing (EC 1.-.-.-) mRNA_2273 10641
Phytoene synthase (EC 2.5.1.32) No genes
Pro-zeta-carotene desaturase, prolycopene producing (EC 1.-.-.-) mRNA_5177 13545
  mRNA_6244 14612
  mRNA_6265 14633
  mRNA_8438 16806
Regulator of carotenoid biosynthesis No genes
Squalene--hopene cyclase (EC 5.4.99.17) mRNA_872 9240
Zeaxanthin glucosyl transferase No genes
gamma-carotene desaturase, putative No genes
gamma-carotene hydroxylase No genes

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