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SEED Subsystem: Carotenoids in
Rhodosporidium toruloides IFO0880
Experiments:
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Role
Gene
Name
"phi-Carotenoid synthase" (EC 1.3.-.- and EC 2.1.1-)
No genes
2-vinyl bacteriochlorophyllide hydratase BchF (EC 4.2.1.-)
No genes
4,4'-diapolycopene oxidase
No genes
Beta-carotene hydroxylase
No genes
Beta-carotene ketolase (EC 1.14.-.-)
No genes
C50 carotenoid epsilon cyclase
No genes
Carotenoid cis-trans isomerase (EC 5.2.-.-)
No genes
CrtT-methyltransferase-like protein
No genes
CrtV-methyltransferase-like protein
No genes
Dehydrosqualene synthase (EC 2.5.1.-)
No genes
Geranylgeranyl pyrophosphate synthetase (
EC 2.5.1.29
)
No genes
Geranyltranstransferase (farnesyldiphosphate synthase) (
EC 2.5.1.10
)
No genes
Hydroxyneurosporene dehydrogenase (EC 1.-.-.-)
No genes
Hydroxyneurosporene methyltransferase (EC 2.1.1.-)
No genes
Hydroxyneurosporene synthase
No genes
Lycopene beta cyclase (EC 1.14.-.-)
No genes
Lycopene cyclase
No genes
Lycopene elongase (EC 2.5.1.-)
No genes
Lycopene epsilon cyclase
No genes
Methoxyneurosporene dehydrogenase (EC 1.14.99.-)
No genes
Neurosporene desaturase (EC 1.-.-.-)
No genes
Phytoene dehydrogenase (EC 1.14.99.-)
mRNA
_217
8585
Phytoene dehydrogenase and related proteins
No genes
Phytoene desaturase (EC 1.14.99.-)
No genes
Phytoene desaturase, neurosporene or lycopene producing (EC 1.3.-.-)
No genes
Phytoene desaturase, pro-zeta-carotene producing (EC 1.-.-.-)
mRNA
_2273
10641
Phytoene synthase (
EC 2.5.1.32
)
No genes
Pro-zeta-carotene desaturase, prolycopene producing (EC 1.-.-.-)
mRNA
_5177
13545
mRNA
_6244
14612
mRNA
_6265
14633
mRNA
_8438
16806
Regulator of carotenoid biosynthesis
No genes
Squalene--hopene cyclase (
EC 5.4.99.17
)
mRNA
_872
9240
Zeaxanthin glucosyl transferase
No genes
gamma-carotene desaturase, putative
No genes
gamma-carotene hydroxylase
No genes
Or select organism:
Rhodosporidium toruloides IFO0880
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