SEED Subsystem: Oxidative stress in Rhodosporidium toruloides IFO0880

Experiments:

Role Gene Name  
Alkyl hydroperoxide reductase subunit C-like protein mRNA_1832 10200
  mRNA_4347 12715
Catalase (EC 1.11.1.6) mRNA_6937 15305
  mRNA_986 9354
DNA binding protein starved cells-like peroxide resistance protein No genes
Fe2+/Zn2+ uptake regulation proteins No genes
Ferric uptake regulation protein No genes
Ferric uptake regulation protein FUR No genes
Ferroxidase (EC 1.16.3.1) No genes
Fumarate and nitrate reduction regulatory protein No genes
Heme oxygenase HemO, associated with heme uptake No genes
Hydrogen peroxide-inducible genes activator No genes
Iron-binding ferritin-like antioxidant protein No genes
Iron-responsive regulator Irr No genes
Manganese superoxide dismutase (EC 1.15.1.1) No genes
Metallothionein No genes
Nitrite-sensitive transcriptional repressor NsrR No genes
NnrS protein involved in response to NO No genes
Non-specific DNA-binding protein Dps No genes
Organic hydroperoxide resistance protein mRNA_2610 10978
Organic hydroperoxide resistance transcriptional regulator No genes
Paraquat-inducible protein A No genes
Paraquat-inducible protein B No genes
Peroxidase (EC 1.11.1.7) No genes
Peroxidase/catalase HPI (EC 1.11.1.6) No genes
Peroxide stress regulator No genes
Peroxide stress regulator PerR, FUR family No genes
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) mRNA_3025 11393
Probable peroxiredoxin (EC 1.11.1.15) No genes
Redox-sensitive transcriptional activator SoxR No genes
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) No genes
Regulatory protein SoxS No genes
Rubrerythrin No genes
Superoxide dismutase (EC 1.15.1.1) No genes
Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) No genes
Superoxide dismutase [Fe] (EC 1.15.1.1) No genes
Superoxide dismutase [Mn/Fe] (EC 1.15.1.1) No genes
Superoxide dismutase [Mn] (EC 1.15.1.1) No genes
Superoxide reductase (EC 1.15.1.2) No genes
Thioredoxin peroxidase 1 (EC 1.6.4.-) No genes
Transcriptional regulator, Crp/Fnr family No genes
Transcriptional regulator, FUR family No genes
Zinc uptake regulation protein ZUR No genes
bacteriophytochrome heme oxygenase BphO No genes
superoxide dismutase [Fe-Zn] (EC 1.15.1.1) No genes
transcriptional regulator, Crp/Fnr family No genes
transcriptional regulator, Fur family No genes

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