SEED Subsystem: Photorespiration (oxidative C2 cycle) in Rhodosporidium toruloides IFO0880

Experiments:

Role Gene Name  
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) No genes
2-oxoglutarate/malate translocator No genes
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) mRNA_4530 12898
Catalase (EC 1.11.1.6) mRNA_6937 15305
  mRNA_986 9354
D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4) mRNA_4871 13239
  mRNA_4960 13328
D-glycerate 3-kinase (EC 2.7.1.31), plant type mRNA_1670 10038
Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Expressed protein possibly involved in photorespiration No genes
Glycerate kinase (EC 2.7.1.31) No genes
Glycine cleavage system H protein mRNA_5785 14153
  mRNA_6816 15184
  mRNA_7074 15442
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) mRNA_1837 10205
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) No genes
Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE No genes
Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF No genes
Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD No genes
Glycolate oxidase (EC 1.1.3.15) No genes
Glycolate permease No genes
Glyoxylate carboligase (EC 4.1.1.47) No genes
Hydroxypyruvate reductase (EC 1.1.1.81) No genes
L-alanine:glyoxylate aminotransferase (EC 2.6.1.44) No genes
Malate synthase (EC 2.3.3.9) mRNA_1089 9457
Malate synthase G (EC 2.3.3.9) No genes
Malyl-CoA lyase (EC 4.1.3.24) No genes
Phosphoglycolate phosphatase (EC 3.1.3.18) No genes
Ribulose bisphosphate carboxylase (EC 4.1.1.39) No genes
Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) No genes
Ribulose bisphosphate carboxylase small chain (EC 4.1.1.39) No genes
Ribulose-1,5-bisphosphate carboxylase, Type III (EC 4.1.1.39) No genes
Serine hydroxymethyltransferase (EC 2.1.2.1) mRNA_3893 12261
  mRNA_4293 12661
  mRNA_4944 13312
  mRNA_1299 9667
Serine--glyoxylate aminotransferase (EC 2.6.1.45) mRNA_451 8819

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