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SEED Subsystem: Protocatechuate branch of beta-ketoadipate pathway in
Rhodosporidium toruloides IFO0880
Experiments:
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Role
Gene
Name
3-carboxy-cis,cis-muconate cycloisomerase (
EC 5.5.1.2
)
No genes
3-oxoadipate CoA-transferase subunit A (
EC 2.8.3.6
)
No genes
3-oxoadipate CoA-transferase subunit B (
EC 2.8.3.6
)
No genes
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
No genes
4-carboxymuconolactone decarboxylase (
EC 4.1.1.44
)
No genes
Beta-ketoadipate enol-lactone hydrolase (
EC 3.1.1.24
)
No genes
Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
No genes
Pca regulon regulatory protein PcaR
No genes
PhaK-like protein
No genes
Protocatechuate 3,4-dioxygenase alpha chain (
EC 1.13.11.3
)
No genes
Protocatechuate 3,4-dioxygenase beta chain (
EC 1.13.11.3
)
No genes
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (
EC 2.8.3.5
)
No genes
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (
EC 2.8.3.5
)
mRNA
_4722
13090
dicarboxylic acid transporter PcaT
No genes
Or select organism:
Rhodosporidium toruloides IFO0880
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