SEED Subsystem: TCA Cycle in Rhodosporidium toruloides IFO0880

Experiments:

Role Gene Name  
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) mRNA_1639 10007
  mRNA_813 9181
  mRNA_906 9274
Aconitate hydratase (EC 4.2.1.3) mRNA_3256 11624
  mRNA_6232 14600
Aconitate hydratase 2 (EC 4.2.1.3) No genes
Aconitate hydratase X, predicted No genes
Aconitate hydratase large subunit (EC 4.2.1.3) No genes
Aconitate hydratase small subunit (EC 4.2.1.3) No genes
Archaeal succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) No genes
Archaeal succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) No genes
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) No genes
Citrate synthase (si) (EC 2.3.3.1) mRNA_2960 11328
  mRNA_2963 11331
  mRNA_180 8548
Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) mRNA_1672 10040
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) No genes
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) mRNA_3748 12116
Fumarate hydratase class I (EC 4.2.1.2) No genes
Fumarate hydratase class I, aerobic (EC 4.2.1.2) No genes
Fumarate hydratase class II (EC 4.2.1.2) mRNA_5633 14001
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) mRNA_2761 11129
Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) mRNA_3313 11681
Malate dehydrogenase (EC 1.1.1.37) mRNA_2246 10614
  mRNA_2810 11178
Malate:quinone oxidoreductase (EC 1.1.5.4) No genes
Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Putative malate dehydrogenase (EC 1.1.1.37), similar to archaeal MJ1425 No genes
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) mRNA_7913 16281
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) mRNA_3609 11977
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) mRNA_7776 16144
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) mRNA_7599 15967
Transcriptional regulator of succinyl CoA synthetase operon No genes
hypothetical protein that often co-occurs with aconitase No genes

Or select organism:

Or view this subsystem at the SEED (slow)