SEED Subsystem: Thiamin biosynthesis in Rhodosporidium toruloides IFO0880

Experiments:

Role Gene Name  
1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) No genes
5-FCL-like protein No genes
ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine No genes
Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine No genes
Cysteine desulfurase (EC 2.8.1.7), IscS subfamily No genes
Glycine oxidase ThiO (EC 1.4.3.19) No genes
Hydroxyethylthiazole kinase (EC 2.7.1.50) mRNA_7845 16213
Hydroxymethylpyrimidine ABC transporter, ATPase component No genes
Hydroxymethylpyrimidine ABC transporter, substrate-binding component No genes
Hydroxymethylpyrimidine ABC transporter, transmembrane component No genes
Hydroxymethylpyrimidine synthesis protein THI5 mRNA_2779 11147
Phosphomethylpyrimidine kinase (EC 2.7.4.7) No genes
Predicted hydroxymethylpyrimidine transporter CytX No genes
Predicted thiamin transporter PnuT No genes
Predicted thiamin transporter ThiT No genes
Predicted thiazole transporter ThiU No genes
Putative cysteine desulfurase, associated with tRNA 4-thiouridine synthase No genes
Rhodanese-like domain required for thiamine synthesis No genes
Substrate-specific component ThiT of thiamin ECF transporter No genes
Substrate-specific component ThiW of predicted thiazole ECF transporter No genes
Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine No genes
Sulfur carrier protein ThiS No genes
Sulfur carrier protein adenylyltransferase ThiF mRNA_2973 11341
  mRNA_579 8947
Thiamin ABC transporter, ATPase component No genes
Thiamin ABC transporter, substrate-binding component No genes
Thiamin ABC transporter, transmembrane component No genes
Thiamin biosynthesis protein ThiC No genes
Thiamin pyrophosphokinase (EC 2.7.6.2) mRNA_8116 16484
Thiamin transport gene THI10 No genes
Thiamin-phosphate phosphatase (EC 3.1.3.-) No genes
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) No genes
Thiamin-phosphate synthase ThiN (EC 2.5.1.3) No genes
Thiamin-regulated hypothetical deacetylase No genes
Thiamin-regulated outer membrane receptor Omr1 No genes
Thiaminase II (EC 3.5.99.2) No genes
Thiamine kinase (EC 2.7.1.89) No genes
Thiamine-monophosphate kinase (EC 2.7.4.16) No genes
Thiazole biosynthesis protein ThiG No genes
Thiazole biosynthesis protein ThiH No genes
Thiazole biosynthetic enzyme Thi4 mRNA_7956 16324
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine No genes
YjbQ (alternate ThiE) No genes
tRNA S(4)U 4-thiouridine synthase (former ThiI) No genes

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