Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1697

Experiment: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10064 and 10065 are separated by 402 nucleotides10065 and 10066 are separated by 345 nucleotides mRNA_1696: 10064 - BLAST membrane-associating domain protein [Rhizoctonia sola..., at 917,668 to 919,209 10064 mRNA_1697: 10065 - BLAST Pro41 protein, putative [Rhizoctonia solani AG-3 Rhs1AP], at 919,612 to 920,343 10065 mRNA_1698: 10066 - K11493 RCC1 regulator of chromosome condensation, at 920,689 to 923,433 10066

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
918,783 + 10064 mRNA_1696 0.72 -0.4
918,954 + 10064 mRNA_1696 0.83 +0.5
918,954 + 10064 mRNA_1696 0.83 +0.8
919,066 + +0.2
919,203 - +1.5
919,222 + +0.1
919,227 - +0.7
919,291 - +0.9
919,292 + -0.6
919,292 + -0.7
919,499 - +0.7
919,696 - 10065 mRNA_1697 0.11 +0.4
919,799 + 10065 mRNA_1697 0.26 -1.9
919,996 + 10065 mRNA_1697 0.52 +0.0
920,132 - 10065 mRNA_1697 0.71 +0.4
920,155 + 10065 mRNA_1697 0.74 -0.6
920,284 - -0.1
920,393 - +0.7
920,463 + +0.8
920,553 + +0.9
920,555 + -0.8

Or see this region's nucleotide sequence