Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1731

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10098 and 10099 are separated by 852 nucleotides10099 and 10100 are separated by 288 nucleotides mRNA_1730: 10098 - KOG4708 Mitochondrial ribosomal protein MRP17, at 60,318 to 61,237 10098 mRNA_1731: 10099 - Hypothetical Protein, at 62,090 to 63,277 10099 mRNA_1732: 10100 - Hypothetical Protein, at 63,566 to 64,770 10100

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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61,262 + +0.0
61,589 + +0.4
61,717 - +1.3
61,737 + -0.0
62,163 - +0.3
62,321 - 10099 mRNA_1731 0.19 +1.0
62,428 - 10099 mRNA_1731 0.28 +2.5
62,766 + 10099 mRNA_1731 0.57 +1.0
62,808 - 10099 mRNA_1731 0.60 -0.6
62,946 - 10099 mRNA_1731 0.72 +0.1
63,340 - +0.0
63,378 + +1.4
63,394 + -0.6
63,397 - -1.4
63,683 + +0.0
63,707 + 10100 mRNA_1732 0.12 +0.0
63,954 - 10100 mRNA_1732 0.32 -0.4
64,217 + 10100 mRNA_1732 0.54 +0.5
64,217 + 10100 mRNA_1732 0.54 -0.2
64,240 - 10100 mRNA_1732 0.56 +2.4

Or see this region's nucleotide sequence