Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2096

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10463 and 10464 are separated by 379 nucleotides10464 and 10465 are separated by 651 nucleotides mRNA_2095: 10463 - Hypothetical Protein, at 57,763 to 59,527 10463 mRNA_2096: 10464 - K05754 ARPC5 actin related protein 2/3 complex, subunit 5, at 59,907 to 60,818 10464 mRNA_2097: 10465 - K03217 yidC, spoIIIJ, OXA1, ccfA YidC/Oxa1 family membrane protein insertase, at 61,470 to 63,350 10465

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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58,967 + 10463 mRNA_2095 0.68 -0.8
58,972 - 10463 mRNA_2095 0.68 +0.5
58,985 - 10463 mRNA_2095 0.69 -0.8
59,133 - 10463 mRNA_2095 0.78 +1.3
59,241 - 10463 mRNA_2095 0.84 -0.5
59,369 + -0.7
59,548 - -0.3
59,552 + -1.4
59,557 - -0.4
59,693 + +0.1
59,694 - +0.3
59,698 - +0.1
59,792 - +0.5
59,823 + +1.7
59,877 + -1.4
59,899 - -0.4
60,826 - +0.5
60,829 + +0.1
60,835 - +0.5
60,849 + +0.2
61,005 - +0.4
61,011 - +0.0
61,027 + +0.1
61,044 + +0.0
61,079 - -1.0
61,134 - +0.2
61,143 + +0.7
61,179 - -1.6
61,197 + +0.2
61,203 + +1.9
61,206 - +0.6
61,381 - +0.0
61,410 + +0.8
61,428 - -0.6
61,435 + +0.5
61,526 - -0.5

Or see this region's nucleotide sequence