Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2467

Experiment: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2467: 10835 - Hypothetical Protein, at 216,514 to 218,202 10835

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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215,542 - +1.6
215,638 - +1.3
215,662 + -0.4
215,668 - +0.7
216,081 + +0.1
216,117 - +0.9
216,141 - +0.0
216,168 + +2.2
216,282 - -0.7
216,293 + +0.8
216,297 + -0.2
216,298 + +0.5
216,302 - +0.4
216,403 - +0.2
216,409 - -0.3
216,446 + -0.6
216,450 + +0.6
216,543 + +1.0
216,562 - +0.6
216,564 - -0.3
216,595 - -0.8
217,721 + 10835 mRNA_2467 0.71 +0.1
217,727 + 10835 mRNA_2467 0.72 +1.5
217,998 + 10835 mRNA_2467 0.88 +0.1
218,001 + 10835 mRNA_2467 0.88 +0.2
218,037 - +3.2
218,120 - -0.4
218,130 + +0.1
218,133 - -0.8
218,137 - +0.9
218,160 + -0.2
218,198 + +0.0
218,261 + -0.0
218,280 + -0.2
218,282 + -1.3
218,287 + +1.2
218,288 - +0.5
218,289 + +0.3
218,295 + +0.3
218,302 + -1.9
218,306 - -0.1
218,306 - -0.9
218,308 + -0.2
218,340 - -0.0
218,343 - -0.9
218,343 + -0.4
218,344 - +0.5
218,350 - +0.6
218,361 - +0.1
218,367 - +0.3
218,392 + -1.1
218,427 - -1.1
218,456 + +0.6
218,482 - +0.3
218,506 + -3.0
218,507 - -1.8
218,561 + +2.5
218,561 + +1.6
218,570 + +2.4
218,573 + -0.0
218,594 + +0.9
218,609 - +1.3
218,642 - +0.6
218,651 + +0.1
218,657 - -0.7
218,659 + +0.0
218,671 - +1.0
218,677 - +1.6
218,747 - -0.0
218,766 - +0.4
218,788 - -0.5
218,794 - +1.5
218,802 + +0.3
218,817 - -0.2
218,830 + +0.8
218,924 - +0.1
218,926 + -0.1
218,947 - +0.4
218,951 - +1.5
218,952 - -0.6
218,954 - -0.2
218,961 - +0.0
218,962 - -0.1
218,969 + +0.5
219,087 - -0.1

Or see this region's nucleotide sequence