Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2843

Experiment: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11210 and 11211 are separated by 393 nucleotides11211 and 11212 are separated by 436 nucleotides mRNA_2842: 11210 - Hypothetical Protein, at 341,749 to 343,529 11210 mRNA_2843: 11211 - Hypothetical Protein, at 343,923 to 345,879 11211 mRNA_2844: 11212 - SUPERFAMILY--SSF54427, at 346,316 to 346,839 11212

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
343,015 + 11210 mRNA_2842 0.71 +1.4
343,139 - 11210 mRNA_2842 0.78 +0.7
343,396 - +0.3
343,626 - -0.1
343,707 + +0.3
343,738 - +1.1
343,882 - +0.8
344,390 + 11211 mRNA_2843 0.24 +0.7
344,396 - 11211 mRNA_2843 0.24 +0.1
344,640 + 11211 mRNA_2843 0.37 +0.7
344,792 - 11211 mRNA_2843 0.44 +0.9
344,868 - 11211 mRNA_2843 0.48 +1.5
344,875 + 11211 mRNA_2843 0.49 +0.4
344,905 + 11211 mRNA_2843 0.50 +1.2
344,978 + 11211 mRNA_2843 0.54 +0.2
345,074 - 11211 mRNA_2843 0.59 +0.2
345,294 + 11211 mRNA_2843 0.70 -0.0
345,319 - 11211 mRNA_2843 0.71 +1.3
345,369 + 11211 mRNA_2843 0.74 -0.4
345,701 - +1.7
346,018 - +0.1
346,185 - +0.6
346,196 + +0.3
346,241 + -0.1
346,512 - 11212 mRNA_2844 0.37 -0.9
346,535 + 11212 mRNA_2844 0.42 -0.1
346,685 + 11212 mRNA_2844 0.70 +1.1
346,802 - +1.2
346,823 - +0.5

Or see this region's nucleotide sequence